Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797853.1_cds_XP_016456838.1_5010
CDS Infomation

[gene=LOC107780767] [db_xref=GeneID:107780767] [protein=DEAD-box ATP-dependent RNA helicase 31-like] [protein_id=XP_016456838.1] [location=complement(join(1169..1396,1578..1760,2127..2342,2735..2830,2918..3004,3078..3284,4011..4235,5979..6034,6281..6387,7113..8335))] [gbkey=CDS]
Sequence

ATGCCGTTCAAGCTTTTACCACAGCTTCGTTTCTTCAATTCTACATTCCCAGTTACCCAT
TTTCCCACCATGAAATGCAATTCAACATTAAAGCCTAAAACAACACCCGTTTTTTCTAGA
ATGTTCCCACACAAGCTCAAGTATCGGTCAATTGGATTTCCAATTTTACCCGCCCAACAA
CTGGAGCTCCGTAGGTTCTCGTCTCGCTCAGGTAGATCAAGACCCGGCTCGGGTTCGGGT
CATGAGGTGCGGATTTCGAAGAGCTTGATTGAAGATGAAGCTGAACTCAGTGATTGGGTA
AGCGGGTTGAGGTCCGATTCGTTTAAGAAAACTCAGGTGTATAGTGATAGTGATGATAAT
GATGGTGGTAGGGGTAAATTTGGTAATAGACGTAGCGGTGGAGAAGAGAGAGGTGAGAAG
AGAAGGAGAGATGTAGATTTTGATGATTTTAATGGGCCTGGTAGGAGAAGTGGAGGCCCA
ATGCAGTCGAATTCAAGAAATGGAGGGAGGTTTGGAAGTGAATTGGACGGTGGCAGAAGT
GGAGGAAGAGGTCAAATGCAGTCGAATTCAAGAAATGGAGGGAGGTTTGGAAATGATAGA
GGGAGTAGAAATGAGGCTAGAGGAAGTGGAGGTCGAGATAGGATGGTGTCATCCCCAAGG
AGAGGAAGGTTTGGAAGTGATATAGGTAGTGGAAGTGAGGGTAGGAGAAGTGGAGGCCGA
GATCGGATGGAGTCCTCTCCAAGGAAGGGAGGGAGGTTTGGAAGTGATATAGGGAGTGGG
AATGAGGGTAGAAGAAGTGGAGGCCGAGATCGGATGGAGTCCTCTCAGAGGAAGGGAGGG
AGGTTTGGAAGTGAAATGGCAGGTCCGAGTGACAGTAGGAGGGGTAAGGGCAGGGTTGGT
AGTGGATATGATGGAGATATGCGAGGACAAGGTGGTAGTGATAGGTTAGGGAGGAAAGAA
GGGACAAATATGGGGCGAGGGAGTTCGACTTTGTTGGATGAAGATGATACAGATAATGAG
GATGAGGAAGAGGAAGAGGAAGAAGAGGAAAGTGGTTATAAGGGGTTTCGAGATTTGATC
GACAGTGAGGAAGAAAGTGAAGAATCTGATGAAGATGATGAGGTTGAGGATGGAAAAATG
TTCTCTTTGGAAAAGGAGGACAGTCCCAGGGCATCAGGCCCGCGCTCAACTGGAAAAAGT
GATTCCCACCTCACTGAGACCAGATTTGATAAGTTTCCACTCTCTCCCTTGTCTCTGAAA
GGAGTTAAAGATGCTGGATACGAAACGATGACCGTAGTGCAGGAGGCAACTCTACCTGCT
ATTCTGAAAGGTAAGGACGTTCTGGCCAAGGCAAAGACTGGCACTGGCAAGACTGTAGCA
TTTTTGCTTCCTTCAATTGAAGTTGTGGTAAACTCACCCCCCAATACTCGTGATCAAAAG
AGGCCACCAGTTCTGGTGCTTGTGATATGCCCTACACGGGAGCTTGCAACTCAAGCAGCT
ACCGAGGCCAACACCTTGTTGAAATATCACCCTTCAATTGGGGTTCAAGTTGTTATAGGA
GGAACACGGCTTGCACTTGAGCAGAAAAGGATGCAAGCAAATCCATGCCAGATACTTGTG
GCGACACCTGGGAGGCTCAGAGATCACGTAGAGAATACAGCAGGATTTGCTACCCGATTA
ATGGGTGTTAAAGTGTTGGTGCTTGACGAAGCTGATCATTTGTTGGATATGGGATTCCGT
AAAGAAATTGAGAAAATAATCTCTGCTATTCCAAAACAGCGCCAAACACTTCTCTTTTCT
GCAACAGTTCCGCCAGAGGTCCGTCAAATTTGCCATATTGCTTTGAAAAGAGATCATGAA
TTTATCAATACTGTTGAGGAAGGCAGTGAAGAGACACACGCACAAGTTCAGCAGATTCAG
CTGGTTGCTCCTCTAGAAACACACTTTTCCCTCCTTTATGCTCTACTAAAAGAGCACATC
GCTGATGACGTTAACTATAAGGTTCTTGTATTTTGCACAACTGCAATGGTAACGAGACTC
GTCGCTGAACTTCTTAGTGAACTTAACCTAAATGTCCGGGAGATTCATTCTCGTAAGCCG
CAAAGCTATAGAACAAGAGTTTCAGATGAATTTCGCAAGTCAACAGGTCTTATTCTAGTT
ACCTCGGATGTCTCTGCCCGTGGAGTAGATTATCCAGATGTCACCTTTGTTATACAGATT
GGTGTGCCAGCTGATAGACAGCAGTATATCCATCGTCTAGGTAGAACTGGGCGGAAAGGT
AAAGAAGGACAAGGCATTTTATTGTTGGCTCCATGGGAGGAATACTTCTTGTCTACAATT
AAAGATTTGCCCATATCAAAGGCACCCGTACCTTTGATTGATCCAGAGACCAAGAAAAAG
GTGGAACGTGCATTATCCCATATAGATATGAAAAGCAAAGAAACTGCATACCAGGCATGG
CTTGGTTACTATAACTCCAACAGAGCTATCGGTAAGGACAAGTACAGACTTGTTGAACTT
GCAAATGAGTTTAGTCGGACAATGGGGCTTGACAACCCTCCAGCGATTCCAAAGCTTGTT
CTTGGGAAAATGGGCTTGAAAAATATTCCCGGACTACGTTCCAAGTAA

Peptide Sequence

PEP ID

XP_016456838.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Nicotiana tabacum]
Sequence

MPFKLLPQLRFFNSTFPVTHFPTMKCNSTLKPKTTPVFSRMFPHKLKYRSIGFPILPAQQ
LELRRFSSRSGRSRPGSGSGHEVRISKSLIEDEAELSDWVSGLRSDSFKKTQVYSDSDDN
DGGRGKFGNRRSGGEERGEKRRRDVDFDDFNGPGRRSGGPMQSNSRNGGRFGSELDGGRS
GGRGQMQSNSRNGGRFGNDRGSRNEARGSGGRDRMVSSPRRGRFGSDIGSGSEGRRSGGR
DRMESSPRKGGRFGSDIGSGNEGRRSGGRDRMESSQRKGGRFGSEMAGPSDSRRGKGRVG
SGYDGDMRGQGGSDRLGRKEGTNMGRGSSTLLDEDDTDNEDEEEEEEEEESGYKGFRDLI
DSEEESEESDEDDEVEDGKMFSLEKEDSPRASGPRSTGKSDSHLTETRFDKFPLSPLSLK
GVKDAGYETMTVVQEATLPAILKGKDVLAKAKTGTGKTVAFLLPSIEVVVNSPPNTRDQK
RPPVLVLVICPTRELATQAATEANTLLKYHPSIGVQVVIGGTRLALEQKRMQANPCQILV
ATPGRLRDHVENTAGFATRLMGVKVLVLDEADHLLDMGFRKEIEKIISAIPKQRQTLLFS
ATVPPEVRQICHIALKRDHEFINTVEEGSEETHAQVQQIQLVAPLETHFSLLYALLKEHI
ADDVNYKVLVFCTTAMVTRLVAELLSELNLNVREIHSRKPQSYRTRVSDEFRKSTGLILV
TSDVSARGVDYPDVTFVIQIGVPADRQQYIHRLGRTGRKGKEGQGILLLAPWEEYFLSTI
KDLPISKAPVPLIDPETKKKVERALSHIDMKSKETAYQAWLGYYNSNRAIGKDKYRLVEL
ANEFSRTMGLDNPPAIPKLVLGKMGLKNIPGLRSK

Transcript Sequence

Gene sequence data has not been registered.